Original Research Article
Modular toolkit for Data Processing (MDP): a Python data processing framework
1 Bernstein Center for Computational Neuroscience, Germany
2 Institute for Theoretical Biology, Humboldt-Universität zu Berlin, Germany
3 Volen Center for Complex Systems, Brandeis University, USA
2 Institute for Theoretical Biology, Humboldt-Universität zu Berlin, Germany
3 Volen Center for Complex Systems, Brandeis University, USA
Modular toolkit for Data Processing (MDP) is a data processing framework written in Python. From the user's perspective, MDP is a collection of supervised and unsupervised learning algorithms and other data processing units that can be combined into data processing sequences and more complex feed-forward network architectures. Computations are performed efficiently in terms of speed and memory requirements. From the scientific developer's perspective, MDP is a modular framework, which can easily be expanded. The implementation of new algorithms is easy and intuitive. The new implemented units are then automatically integrated with the rest of the library. MDP has been written in the context of theoretical research in neuroscience, but it has been designed to be helpful in any context where trainable data processing algorithms are used. Its simplicity on the user's side, the variety of readily available algorithms, and the reusability of the implemented units make it also a useful educational tool.
Keywords: Python, Modular toolkit for Data Processing, computational neuroscience, machine learning
Copyright: © Wilbert, Berkes, Wiskott and ZitoWilbert. This is an open-access article subject to an exclusive license agreement between the authors and the Frontiers Research Foundation, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are credited.
*Correspondence: Tiziano Zito, Bernstein Center for Computational Neuroscience, Philippstraße 13, House 6, Humboldt-Universität zu Berlin, 10115 Berlin, Germany
Citation: Wilbert N, Berkes P, Wiskott L and Zito TWilbert N (2008) Modular toolkit for Data Processing (MDP): a Python data processing framework. Front. Neuroinform. doi:10.3389/neuro.11.008.2008
Received: 05 September 2008; paper pending published: 26 October 2008; accepted: 19 December 2008;
Edited by:
Rolf Kötter, Radboud University Nijmegen, The Netherlands
Reviewed by:
Nicholas T. Carnevale, Yale University School of Medicine, USA
*Correspondence: Tiziano Zito, Bernstein Center for Computational Neuroscience, Philippstraße 13, House 6, Humboldt-Universität zu Berlin, 10115 Berlin, Germany


